Lecture Notes:

Handout 1: Introduction to MatlabAugust 30, 2001 HTMLWord Document
Handout 2: Intro to Protein StructureSeptember 4, 2001 HTMLWord Document
Handout 3: Interpolation & Splines September 11, 2001 HTMLWord Document
Additional Notes on Cubic splinesSeptember 13, 2001 PDFPostscript
Handout 4: Introduction to Rotations September 20, 2001 HTMLWord Document
Handout 5: More about Rotations September 25, 2001 HTMLWord Document
Handout 6: Sequence AlignmentOctober 11, 2001 HTMLWord Document
Handout 7: Gap Opening and Extension October 18, 2001 PDFPostscript
Notes on Matlab Arrays and StringsOctober 18, 2001 PDFPostscript
Handout 8: OptimizationOctober 23, 2001 HTMLWord Document
Handout 9: More OptimizationOctober 25, 2001 HTMLWord Document
Handout 10: Conjugate GradientsNovember 1, 2001 HTMLWord Document
Handout 11: Differential EquationsNovember 6, 2001 HTMLWord Document
Handout 12: Monte-Carlo SamplingNovember 8, 2001 HTMLWord Document
Handout 13: Simple Protein FoldingNovember 13, 2001 HTMLWord Document
Handout 14: Pseudo-Random NumbersNovember 15, 2001 HTMLWord Document
Handout 15: Gaussian Random NumbersNovember 20, 2001 HTMLWord Document
Handout 16: Initial Value SolversNovember 27, 2001 HTMLWord Document
Handout 17: Protein PotentialsNovember 29, 2001 HTMLWord Document
Matlab and Differential EquationsNovember 29, 2001 PDFPostscript
Handout 18: Optimization and SmootingDecember 6, 2001 HTMLWord Document